Research Software

Your Toolbox for Getting the Job Done

We maintain and can install a wide variety of software in our computing environments to meet your research needs.

Please note the expectation is that the researcher is already proficient in its use.

     

 

Research Computing Software Listing
Software Version Application Last Reviewed
BCFtools 1.2 Bioinformatics May 13, 2015
BLAST+ 2.2.30 Bioinformatics May 13, 2015
Bowtie 1.1.1 Bioinformatics May 13, 2015
Bowtie 2 2.2.5 Bioinformatics May 13, 2015
BWA 0.7.12 Bioinformatics May 12, 2015
Crystal14 1.0.3 Quantum chemistry, Molecular mechanics December 12, 2015
Cufflinks 2.2.1 Bioinformatics May 13, 2015
FastQC 0.11.3 Bioinformatics May 13, 2015
FASTX-Toolkit 0.0.13 Bioinformatics May 13, 2015
GAMESS-US 2014 Dec 5 Quantum chemistry, Molecular mechanics December 12, 2015
Gaussian 09 Revision D.01 Quantum chemistry, Molecular mechanics May 6, 2015
HTSlib 1.2.1 Bioinformatics May 13, 2015
OrthoDB 1.6 Bioinformatics December 12, 2015
Proteinortho 5.11 Bioinformatics December 12, 2015
Samtools 1.2 Bioinformatics May 13, 2015
Trimmomatic 0.27 Bioinformatics May 13, 2015
TrinityRNASeq 2.0.6 Bioinformatics May 13, 2015