Software Listing 

We maintain and can install a wide variety of software in our computing environments to meet your research needs.  Please note the expectation is that the researcher is already proficient in its use.   

Below is a sample of applications and tools used within the research environments. 

Research Software
Software Application
BCFtools Bioinformatics
BLAST+ Bioinformatics
Blender Graphical Rendering
Bowtie 2 Bioinformatics
Bowtie Bioinformatics
BWA Bioinformatics
Crystal14 Quantum chemistry, Molecular mechanics
Cufflinks Bioinformatics
FastQC Bioinformatics
FASTX-Toolkit Bioinformatics
GAMESS-US Quantum chemistry, Molecular mechanics
Gaussian 09 Quantum chemistry, Molecular mechanics
HTSlib Bioinformatics
NWChem Chemistry
OrthoDB Bioinformatics
PhotoScan Photogrammetry
Proteinortho Bioinformatics
Python Scripting / Programing
Reality Capture Photogrammetry
Samtools Bioinformatics
Tensor Flow Machine Learning
Trimmomatic Bioinformatics
TrinityRNASeq Bioinformatics