Software Listing 

We maintain and can install a wide variety of software in our computing environments to meet your research needs.  Please note the expectation is that the researcher is already proficient in its use.   

Below is a sample of applications and tools used within the research environments. 

SoftwareApplication
BCFtoolsBioinformatics
BLAST+Bioinformatics
BlenderGraphical Rendering
Bowtie 2Bioinformatics
BowtieBioinformatics
BWABioinformatics
Crystal14Quantum chemistry, Molecular mechanics
CufflinksBioinformatics
FastQCBioinformatics
FASTX-ToolkitBioinformatics
GAMESS-USQuantum chemistry, Molecular mechanics
Gaussian 09Quantum chemistry, Molecular mechanics
HTSlibBioinformatics
NWChemChemistry
OrthoDBBioinformatics
PhotoScanPhotogrammetry
ProteinorthoBioinformatics
PythonScripting / Programing
Reality CapturePhotogrammetry
SamtoolsBioinformatics
Tensor FlowMachine Learning
TrimmomaticBioinformatics
TrinityRNASeqBioinformatics